Sentence examples for basis of sequence data from inspiring English sources

This in silico Northern analysis aims at detecting, on the basis of sequence data, the evolution of transcript levels.

Most HCV isolates can be classified into 6 major genotypes on the basis of sequence data from the NS5B, core, and E1 genomic regions.

Restriction enzyme Sau-3 (5U) and Hha I (5 U), (New England Biolabs) were used on the basis of sequence data available for this amplified product.

Although Hiatt's approach provides an experimental method for exploring the effects of variation in enhancer elements, it also indicates that de novo prediction of these effects on the basis of sequence data alone will be extremely challenging.

Purified colonies were sequenced by 16S rRNA sequencing and identified using the EzTaxon server [ 81] on the basis of sequence data and sequencing results compared with pairwise identity of strain L2-4.

To illustrate the overall performance of classification on basis of sequence data, we generate Receiver Operating Characteristic (ROC) curves for the SVMs equipped with the Local Alignment kernel [ 24].

On the basis of sequencing data, macrolide resistance can be assumed in 3 of the 96 M. pneumoniae positive specimens (3.1%).

On the basis of sequencing data we selected a region between -437 to −270 bp relative to exon 1 of the PLA2R1 gene (black line in Figure 2B) which covers the 5'-CpG sites 6 14 (according to our nomenclature; -415 bp to −298 bp from exon 1) and localizes in the proximal promoter of PLA2R1.

On the basis of comparison of sequence data of the VP1 gene, existence of 8 serotype O topotypes has been demonstrated within samples collected around the world (12 ).

On the basis of combined sequence data of 16S rRNA, fusA and groEL genes, the symbionts of Columbicola spp. were also divided into three distinct clades A, B and C in the Gammaproteobacteria.

It encompasses the reconstruction of the evolutionary history of organisms and macromolecules (i.e., molecular phylogeny) on the basis of the sequence data of nucleic acids and proteins.