Sentence examples for basis of protein sequence from inspiring English sources

On the basis of protein sequence similarity and chemical reasoning, the biosynthesis of CDA is rationalized.

Locations of the NADPH binding site of the beta-ketoacylreductase active site and of the dehydratase active site are proposed on the basis of protein sequence homologies to catalytic sites in other enzymes.

Pairwise alignment is the basis of protein sequence comparison methods.

Mammalian Prdx enzymes can be subdivided into six subtypes (Prdx1, Prdx2, Prdx3, Prdx4, Prdx5, and Prdx6) on the basis of protein sequence and catalytic mechanism (14, 36, 43).

Consequently, in 1997 Krieger suggested that the SRs be divided into 8 distinct classes, termed A through H, on the basis of protein sequence comparisons and domain architecture [ 6].

On the basis of protein sequence alignment and phylogenetic analysis, it has been suggested that two of these orthologs belong to the barhl1 paralog group (nominated barhl1.1 and barhl1.2) while the third belongs to the barhl2 group [ 6, 12].

Due to small size of these domains, only a few branches with reasonably high bootstrap values have been identified in trees constructed on the basis of protein sequences.

The resulting mass lists were further assigned on the basis of the protein sequence of Ub with or without the diglycine (GG) modification at each lysine residue using tolerances of 10 and 20 ppm for precursor and fragment ions, respectively.

Phylogenetic analysis was performed on the basis of an alignment of protein sequences obtained using MUSCLE [ 53].

The essence of the T-REX approach is in comparison of two trees: a larger gene content tree T, such as the one shown in Figure 1, and a smaller tree constructed on the basis of the alignments of protein sequences from each individual POG (a sequence family tree T sf ).

ADAMTS2, -3 and -14 are known members of a well-recognized ADAMTS sub-family on the basis of their protein sequence characteristics [ 44].