Sentence examples for basis for alignment from inspiring English sources
Consensus contigs developed across all 27 genotypes served as the basis for alignment to detect SNP.
Other basic parameters like number of reads per contig as well as the average coverage were comparable, constituting a suitable basis for alignment analyses of contigs.
Recently, we proposed to use spaced words, defined by patterns of match and don't care positions, as a basis for alignment-free sequence comparison (Boden et al., 2013).
Using multiple reference sequences as a basis for the alignment of the candidate sequences significantly improves alignment quality.
To check sensitivity of additional taxon sampling from a number of the lophiiforms to the results reported in Yamanoue et al. [ 27], we used their pre-aligned sequences as a basis for further alignment with the 33 sequences.
To check sensitivity of additional taxon sampling of a number of the lophiiforms to the results reported in Yamanoue et al. [ 27], we used their pre-aligned sequences as a basis for further alignment with the newly determined sequences from 33 lophiiforms.
The effects on the beam quality are illustrated providing the basis for the alignment procedure and jitter tolerances.
The Evolution Theory speculates that two queried proteins may have a common evolutionary ancestor and serve as the basis for sequence alignments, which determine whether there exists sufficient similarity between two sequences.
We used this structural alignment as a basis for the sequence alignments shown in Fig. 1f and Additional file 1: Figure S1, S4, as well as for superposition of multiple structures in Additional file 1: Figure S5.
The results on IRMBASE 2 and DIRMBASE 1 now tell us how the alignment programs perform in cases when it is unknown if every motive occurs in every sequence thus providing a more realistic basis for assessing the alignment quality on locally related sequences compared to the situation in the old IRMBASE 1 where every motive always occurred in every sequence.
