Sentence examples for basic annotation of the from inspiring English sources
This resulted in the basic annotation of the PRG list in terms of the cell-type; in this case astrocytes/microglia versus neurons.
The basic annotation of 8358 predicted protein coding genes were done using blastp against current RefSeq fungal protein database and protein NR database.
These pORFs were clustered to assess the diversity of function from each sample, and were compared against known databases to provide basic annotation of known proteins and potential identification of novel pORFs.
Basic annotation of all predicted protein coding sequencing was assigned based on similarity to ascomycete peptides in GenBank with Blast2GO [ 122] and to conserved domains in the Pfam database [ 123] (Additional file 10: Table S7).
The category 'General' provides all the basic annotations of each lncRNA including genomic loci, the associated diseases and various linkouts.
Basic annotations of small ncRNAs were performed following standard protocols from Insilicogen.
The basic annotation information of Affymetrix probesets and corresponding transcripts of immunogenes is shown in the Additional file 2. Among the subsection of 1,999 transcripts of immunogenes, a total of 1,115 transcripts were detected to call Present in both normal and H. parasuis-infected samples.
In addition to basic annotation information, the expression level and imprinting information of mammalian lncRNAs were also deposited in specific databases [17,119,120].
Using a small modification to the basic annotation pipeline, we defined a small minority of these frameshifted transcripts (17, 4% of the dmRNAs) that harbour compensating frameshifts, resulting in movement back into frame.
Saint is an application which supports the addition of basic annotation to SBML entities and identifies new reactions which may be valuable for extending a model.
Additionally, we report that even with comprehensive manual harvesting, we were not able to capture 100% of information to fill for the basic annotation fields.
