Sentence examples for basic alignment from inspiring English sources

If a protein was uncharacterized in the database, a basic alignment search tool (BLAST) was performed on the UniProt database that is used to find regions of local similarity between sequences to identify members of the same gene family.

The basic alignment features remain unchanged.

Given a phone lattice, the basic alignment procedure is that of finding an ordered link equivalence that is consistent with the lattice ordering and is also a total ordering.

We extract training data (sentences annotated with grammatical and information structure and their surface word orders) from the Prague Dependency Treebank (Hajic et al., 2001) and use basic alignment (edge-most) constraints on grammatical and information structure to predict the surface order of the subject, verb, and object.

We agree on, and are in basic alignment about, the need for comprehensive impact program assessments.

Primers and probes were designed using the software Primer Express 3.0 (Applied Biosystems) and tested for specificity by the basic alignment search tool BLAST.

My mind was blown by how succinctly Midori was able to communicate the basic alignments within kinky sexual desire and help us find the words to express where our appetites lie at any given point in time (because yes, they do change!).

Basic alignments for tree construction and corresponding sequence distance matrices were calculated using the ClustalW algorithm with Blosum protein weight matrix in Lasergene 8 (DNAStar Inc, Madison, USA) with HvPT1 [ 77] included as outgroup.

Basic local alignment search tool and multiple sequence alignment (MSA) tool were employed to search for related proteins.

All primers were checked using the alignments of sequences, and subsequently with the basic local alignment search tool (BLAST; http://www.ncbi.nlm.nih.gov/BLAST/).nih.gov/BLAST/

The basic local alignment search tool (BLAST) [ 40] yielded significant alignments to Stowaway elements from barley, wheat, and/or rye in the Entrez nucleotide database [ 41].