Sentence examples for bases in a sequence from inspiring English sources

Image contrast simulations of model rectangular features mimicking the individual nucleotides in a DNA strand have been developed to translate measurements of contrast on bulk DNA to the detectability of individual DNA bases in a sequence.

The idea is that by cutting out a handful of bases in a sequence that produces, for instance, sickle cell anemia, you can disable that gene altogether.

To simplify these regions and focus on short indel events, we considered only gaps of ≤10 bp, allowing for gaps between MAF blocks provided that they connected contiguous bases in a sequence.

Therefore, the first four bases in a sequence read encode the index, and the subsequent 26 27 nucleotides are tag sequences derived from mRNA, including the recognition site of the anchoring enzyme (Figure 1, bottom).

P-cycle sequencing, which permits more uniform labeling of all bases in a sequence, clearly detected the mutation, whereas fluorescent sequencing did not.

Empirical studies (see e.g. [ 4- 8]) have shown that the preceding or succeeding bases in a sequence have a large influence on the occurrence of a base, both in coding and non-coding sequences.

The base-pairing probability distribution (BPPD) per base in a sequence were measured using NQ [ 83], while the base-pair distance for all the pair of structures were measured using ND [ 84].

The consequences of these differences are not fully understood, although a recent study suggests that TET3 can recognize non-methylated cytosine bases in any sequence context with a slight preference for CpG [ 20].

e The length N for which 90% of all bases are in a sequence of this length or longer.

d The length N for which half of all bases are in a sequence of this length or longer.

Alta-Cyclic performs a grid search to find phasing parameters for which the SVMs can optimally predict the bases in a reference sequence, which requires training the SVMs at every grid point.