Sentence examples for bases for the sequence from inspiring English sources

We shall construct the Schauder bases for the sequence spaces (b_{0}^{r,s}(nabla ^{(m)})) and (b_{c}^{r,s}(nabla^{(m)})).

PHRED software was used to call bases for the sequencing of the LongSAGE tags[ 33, 34].

The Ensemble database is the base for the sequences and gene names used by the program.

Assembled transcripts from the six assemblies were aligned to the draft reference sequence using BWASW with default parameters (a mode of BWA) [ 20], and the numbers of covered bases for the diploid sequence were calculated as shown in Table  8.

Overall the average length of these transcript assemblies was comparable to the overall average transcript assembly length; 420 bases compared to 531 bases for the singleton sequences, which were highly enriched in the Solanaceae-specific sequence data set.

The Sequenza results were obtained using version 2.1.0 with default parameters; the input was generated by the python script sequenza-utils.py version 2.1.0 with default binning size of 50 bases for the exome sequencing or 200 bases for the whole-genome sequencing.

Newbler assembler v 2.3 (Roche) was used to batch sequences based on MID-identifiers and to combine corresponding sequences derived from forward and reverse reads with a similarity of 99% and an overlap of 400 bases for the bacterial sequences.

Base calling for the sequences used in Eclat training was performed using Phred [ 41] and the training sequences were compared against a modified NCBI UniVec database using cross_match to identify vector and polylinker sequence substrings prior to use in Eclat.

Key: The nucleotide position and base for the consensus sequence is listed across the top.

All sequencing platform vendors provide quality scores for individual bases in the sequence reads.

The CUDA version was able to calculate base-pair probabilities for the sequence for the full HIV-1 NL43 genome (9709 nucleotides) in 27 minutes.