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We explored the solution space by selecting genes based upon their frequency of appearance in the multiple runs.
Table S3 in Additional File 2 shows the weights assigned to few hypothetical n-grams based upon their frequency of occurrence in the dataset.
In other words, the probability of significant features (important genes) appearing in the solution space was estimated based upon their frequency.
Figure 6C summarizes expression levels of TNF α, IL1 β, CCR7, and CD206 based upon their frequency percentages of each markers and demonstrate deviation toward M1 macrophages.
The four base pair core, CCAT, is scored at 100% for each base plus 2. Flanking bases vary in score from 0 to 1 based upon their frequency in known YY1 binding motifs.
Common CNVs were removed based upon their frequency in DGV (Database of Genomic Variants) [ 15, 16] and Chinese control data sets which were compiled from four published data sets including 10 individuals from Park et al. [ 17], 779 individuals from Lin et al. [ 18], 99 individuals established by SGVP (Singapore Genome Variation Project) [ 19] and 80 Han Chinese by Lou et al. [ 20].
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From the dataset of 2,031 prokaryotic genomes, our method successfully obtained a rich set of common and unique n-grams (n = 12) and weighted them based upon their natural frequency of occurrence across the genomes.
Chloroplast DNA, rDNA, and "Probable Repeats" (i.e., sequences that appear to be repetitive based upon their relative frequency in the HR sequence set) each account for about 6-86-8% tHR Hreadsds.
Thirteen tag single nucleotide polymorphisms (SNPs) in RGS17 and eight tag SNPs in RGS20 were selected from public sources such as the NCBI dbSNP database (http://www.ncbi.nlm.nih.gov/SNP), the HapMap Genome Browser (http://www.hapmap.org), and the SNPbrowser software v 4.0 (Applied Biosystems), based upon their minor allele frequencies and linkage disequilibrium (LD) information (Table 2).
Table 1 depicts the frequency of students with physical summary scores in each category based upon their BMI classification.
Table 2 shows the frequency of students with psychosocial summary scores in each category based upon their BMI classification.
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based upon their leadership
based upon their plasma
based upon their schooling
based upon their location
based upon their system
based upon their ability
based upon their artist
based upon their ethnicity
based upon their level
based upon their toxicity
based upon their crystal
based upon their shareholding
based upon their recommendation
based upon their number
based upon their energy
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