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The estimation set is divided into k subsets (based upon subjects), of which k - 1 subsets form the training set and the remaining subset forms the validation set.
Here for, the data was divided based upon subjects into two sets; one test set containing 546 subjects and an estimation set of 2,000 subjects to estimate the weights in the canonical variates, the transformation functions and to determine the optimal number of variables within the SNP dataset.
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All exposures were measured based upon subject self-reports, and some degree of exposure misclassification may have occurred.
Potential SA participants were identified using the Nam Pechan software based upon subject name and visual inspection by PSG [ 12]; and for AC subjects practice staff were consulted.
We estimated 3 parameters, based upon subject's performance, using the Hierarchical Gaussian Filtering Toolbox to compute maximum a posteriori estimates (Mathys et al. 2011; Mathys 2012).
This approach is based upon subjecting millions of pooled segregants to a selection for a phenotype and then analysing genome-wide changes in allele frequency within the population.
For treatment of a bleeding episode, the dose was based upon subject's PK profile, WFH guidelines and local standard of care, with a minimum dose of 25 IU kg−1 rIX-FP.
STI history was based upon subject self-reported history of the following infections: gonorrhoea, syphilis, genital herpes, genital warts or condylomas, human papillomavirus, chlamydia, HIV, AIDS, trichomonas, and/or any other sexually transmitted disease.
The hamster products were not sequenced, but based upon subject rankings derived from the experience with the canine products, 510 (46.9%) resulted in amplifications with a subjective ranking of 2, 3, or 4 that were judged to be likely to contain the correct product (see Fig. 1 for an explanation of the ranking system and Table S1 [Additional file 1] for individual rankings).
Hospital admission and mortality data based upon study subjects' usual place of residence were mapped to SLA 2006 boundaries.
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