Sentence examples for based upon alignment from inspiring English sources

Read frequencies based upon alignment to a reference transcript database and to the human genome were almost indistinguishable by these metrics.

Based upon alignment of six orthologous proteins (Fig. 3A), a molecular surface representation of SnoN-DHD was rendered and colored according to the degree of sequence conservation (Fig. 3B).

The range of the multiple alignments to be included in the analysis was decided based upon alignment quality.

PCR primers based upon alignment of cytochrome b sequences of mammalian and avian species were obtained from previously published primer sequences (Table 1).

The x-ray is repeated at 5 and 15 degrees and the most acceptable image (based upon alignment of the medial tibial plateau) is used for analysis.

Based upon alignment similarity, the ITS2 sequences formed the same groups that were recovered in the psbA/ rbcL spacer analysis; therefore, we used the same group notation for both datasets.

Scores based upon pairwise alignment percent identity scores in individual alignments.

Based upon the alignment, a phylogenic tree was created (Figure 2C).

UBIAD1 homologs were identified in 19 species and protein sequences were aligned using ClustalX [15] (Figure 2) Homology was high among mammals based upon pairwise alignment scores.

The consistent outcome of various phylogenetic methods based upon this alignment shows that Prod1 arises in a clade comprising only non-mammalian proteins.

One noticeable feature regarding HupBMtb, based upon sequence alignment of HU orthologs from different bacteria, was the presence at its C-terminal end a highly basic extension (Supplementary Figure S1), designated as the C-terminal region (CTR), which prompted us to examine its role.