Sentence examples for based on whole transcriptome from inspiring English sources
We considered two paths towards finding novel therapeutics based on whole transcriptome profiling information.
We then performed open reading frame (ORF) prediction in combination with SignalP analysis based on whole transcriptome shotgun sequencing (RNAseq) data.
It has been shown that TSS identification based on dRNA-Seq data is superior to an estimation of transcript boundaries based on whole transcriptome RNA-Seq reads [ 32].
These results indicate a high correlation between biological replicates but not between samples of different origin, suggesting that discrimination between samples is possible based on whole transcriptome analysis.
Operon predictions based on whole transcriptome sequencing, dRNA-Seq transcription start sites, and operon and transcription terminator site determination with DOOR [ 72], OperonDB [ 73], and TransTermHP [ 74].
Here, we describe RNA-seq based gene annotations for Drosophila outgroup species D. simulans, D. yakuba, and D. ananassae based on whole transcriptome sequencing of male and female adult tissues.
Here, we are using comparative transcriptomics — based on whole-transcriptome shotgun sequencing (RNA-seq), and de novo transcriptome assembly [ 7] — to examine deep phylogenetic relationships among Diptera (flies, midges, and mosquitoes).
Gene transcript models were based on whole-genome transcriptome data (Xu et al., 2009).
In this study, we identified the complete nuclear receptor repertoire of the copepod T. japonicus based on whole genome sequence and transcriptome data [ 30].
In addition to high-throughput transcriptome studies based on whole mycorrhizal roots dominated by later stages of the symbiotic interaction, which identified sets of AM-induced genes [ 12- 17], several attempts were undertaken in recent years to enrich mycorrhizal roots for early symbiotic stages.
