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The maximum false positive score, based on ungapped alignment segments from permuted versions of the data set, was 13.6±0.8 (n = 10).
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Fifth, sequences were collapsed based on ungapped alignments for which neither sequence was required to be fully aligned.
Katoh, K. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform.
The nucleotide alignment was generated based on the protein alignment using codon alignment.
To this end, we first define the local kernel alignment based on centralized kernel alignment.
This alignment is based on the Multiz alignment algorithm [ 17].
We're providing a similar kind of service that's not based on algorithms, but is based on the alignment of the planets and the stars". .
Based on total ungapped length of chromosomes, HM density appeared particularly homogeneous among human autosomes (249.3 ± 10.6 HM/Mb) but the X chromosome exhibited a lower density (207.1 HM/Mb).
The problems with the measure are more regional than based on party alignments.
A nucleotide alignment was created based on the amino acid alignment using DAMBE [55].
Nucleotide (codon) alignments were based on the amino acid alignments.
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