Sentence examples for based on transcriptome re-sequencing from inspiring English sources

Geraldes et al. [ 36] reported a higher SNP rate – approximately one per 142bp – based on transcriptome re-sequencing of a panel of P. trichocarpa individuals that was similar to that of Slavov et al. in terms of geographic diversity (though with the notable addition of several clones from near the northern range limit in the northwest tip British Columbia).

There are many genome-wide studies based on transcriptome sequencing (RNA-Seq), cDNA sequencing, and tiling microarrays (see for example [ 7- 9]).

Based on transcriptome analysis, unique sequences encoding chloroplastic and mitochondrial PDH have been successfully identified.

Phylogenetic studies based on transcriptome sequences yielded well-resolved and highly supported tree topologies for many groups of animals [ 46].

Markers based on transcriptome sequences are useful for the detection of functional variation and gene associated genetic analysis [ 32].

Based on transcriptome sequencing, we sought to detect fusion genes and identified a total of 16 fusion genes.

Subsequently, the CSSLs were genotyped using high-throughput sequencing, and an ultrahigh-quality physical map based on whole-genome re-sequencing was constructed.

We have constructed the first CNVs map in silkworm based on next-generation re-sequencing data.

Based on whole-genome re-sequencing analysis of 12 mutant lines, the average number of base changes was 12,796 per line.

Finally, a recent study based on deep re-sequencing of human transcriptome [ 14] uncovered a new repertoire of plausible intronic hexamers supporting the tissue-specific splicing events.

Open image in new window Figure 5 NSC/NPC subtype identification of 22 sequenced single cells based on transcriptome analyses.