Sentence examples for based on transcriptome expression from inspiring English sources

This feature was also verified by principle component analysis (PCA) based on transcriptome expression profiling, which showed that soybean straw (a dicot crop) was separated a little from the other four monocot straws.

Since the version 1.0 annotation, based on a repeat-masked Brachypodium genomic sequence, was missing genes in other families, such as the F-box family [ 27], we also searched for Brachypodium GH genes in the unmasked genome, using an annotation pipeline based on transcriptome expression evidence as well as a protein domain search.

Thus, a method to estimate relative transcriptome sizes is needed for determining expression differences per cell based on transcriptome-normalized expression profiling data.

In this study, we aimed to provide molecular insights into genes preferentially expressed in rice mature anthers by establishing their regulatory networks based on transcriptome profiling and gene co-expression analysis.

Based on transcriptome data prediction results, they regulate the expression of TFs.

Expression of pluripotency-associated genes was assessed based on transcriptome data showing that both mink ES and iPS cells represent one cell type.

Such an observation questions the numerous studies based on transcriptome analyses, which may lead to a misinterpretation of gene expression levels.

The users can also search for the information about the expression of genes, which provides the expressional values (based on transcriptome) in different tissues.

The subset of PLLs driving expression in pollen is largely consistent with that determined based on transcriptome analysis (see Additional file 1) or RT-PCR [ 16].

Although Aqu2 is primarily based on transcriptome evidence, both Aqu1 and Aqu2 show similar coverage of metazoan orthologues and support the expression of conserved metazoan proteins during Amphimedon development.

We can alleviate this problem by jointly analyzing the expression levels of groups of functionally related genes, which can be obtained based on transcriptome analysis [21] [23], GO annotations [24], or other sources.