Sentence examples for based on transcript length from inspiring English sources
A probability weighting function (PWF) was generated based on transcript length and was applied to eliminate the bias arising from this parameter.
Finally, to test the effect of gene size on reproducibility, we repeated the above assessment, this time sorting genes based on transcript length (Additional file 6).
The current classification of NC-RNAs is mainly based on transcript length and/or biogenesis, thereby ignoring the high degree of functional overlap shared by some of those molecules.
We used CPM here instead of TPM to filter minimally expressed transcripts because with TPM some short transcripts with questionably low expression may not be detected due to the normalization based on transcript length.
Although our assembly appears to be of reasonable quality based on transcript metrics such as N50, mean length, and coverage, determining whether transcripts are in fact correctly assembled poses a particular challenge.
For each platform we first binned all genes into equal gene number bins based on their transcript length.
ncRNAs are a large class of molecules that can be divided into two groups based on their transcript lengths: small ncRNAs (<200 bp), such as transfer RNAs (tRNAs), ribosomal RNAs (rRNAs), small nucleolar RNAs (snoRNAs), microRNAs (miRNAs), small interfering RNAs (siRNA), PIWI-interacting RNAs (piRNA), antisense RNAs, and promoter-associated RNAs (PARs) and long ncRNAs (lncRNAs, >200 bp) [ 4].
Quotations are based on transcripts provided by Factbase.
Some are based on transcripts and audio recordings, others are stories recited through the generations.
Furthermore, using previously described methods [ 17], read-depth analysis of unaligned transcripts was performed, and a non-redundant set of transcripts was generated based on sequence length; these transcripts were combined to form the final Nr unigene set.
