Sentence examples for based on total read from inspiring English sources

Top fifteen OTU's based on total read count number among the hot spring samples.

ComiR scores for microRNAs showing the greatest difference in expression based on total read count.

SNPs within the set tested for ASE (n = 8145) were divided into deciles based on total read depth.

Secondly, the sequencing data from the cycloheximide-treated sample were used to calculate overall coverage (based on total read length) and an RPKM value.

Furthermore, all libraries showed a high degree of correlation, with Pearson correlation coefficients ranging from 0.80 – 0.98, indicating that overall gene expression was similar across genotypes and that replicate datasets showed consistency for gene expression values (Table  4).> -wrap-foot> coefficientscoefficients were calculated based on total read counts obtained for individual MDPs.

The classification of the total data was performed by using the BLASTN/BLASTX tools against GenBank NT/NR databases with an E-value cutoff of 10-5 based on total reads and contigs.

Nuclei were excluded as outliers based on total aligned reads and total gene count, or extreme-outliers, based on clustering (Supplementary Fig 2a b).

The species richness analysis was performed by using MEGAN based on total sequencing reads [ 70].

After normalization by the expected depth based on total mapped reads, the normalized depth for each GC content bin reflects biases of each experiment and can be compared with sequenced samples.

One method was based on the total read coverage and the other method was based on repeated detection in replicate RNAseq libraries (see description in Methods).

We then selected a single representative event for each cluster, based on total counts of spliced reads supporting the events.