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We then selected a single representative event for each cluster, based on total counts of spliced reads supporting the events.
Here, the measures of richness, abundance based on total counts of individual species, and cover have been used to demonstrate resiliency by treatment type.
Compared with techniques based on total counts, MMDiff can identify localised changes which alter the shape of a peak.
A cellulosome-component matrix was constructed based on total counts for each annotation for all genomes, with each row corresponding to each of the ten organisms and each column a given cellulosomal annotation.
Principal component analysis, based on total counts of each polar amino acid type, showed a distinct separation of species from cold and warm climates, with tropical octopods being most distant from Antarctic and Arctic octopods.
These results are consistent with earlier work showing that a 'neighborhood majority' approach based on total counts performs as well or better than several sophisticated global network approaches (Nabieva et al., 2005), as well as earlier work suggesting that Neighborhood performs better than Mcode for the task of function prediction (Sharan et al., 2007).
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For each character we calculated the frequency based on total count (CHRCount) and based on CD (CHR-CD).
From 2003 2004, the FACSCount apparatus (Becton-Dickenson) was used and percentage counts were calculated based on total lymphocyte counts of a separate sample.
After SDS-PAGE, analysis of the 43 kDa band by mass spectrometry identified the dominant protein (based on total peptide counts) as TbGSK3short (Tb927.10.13780), a CDXG kinase previously found to be essential in BSF T. brucei (Ojo et al., 2008).
Furthermore, all libraries showed a high degree of correlation, with Pearson correlation coefficients ranging from 0.80 – 0.98, indicating that overall gene expression was similar across genotypes and that replicate datasets showed consistency for gene expression values (Table 4).> -wrap-foot> coefficientscoefficients were calculated based on total read counts obtained for individual MDPs.
Top fifteen OTU's based on total read count number among the hot spring samples.
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