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Based on these clusters, Rarefaction curves [46], Shannon diversities [62] and Chao1 richness estimations [63] were calculated using RDP software.
Using the MARSBAR procedure, box-shaped ROIs were refined based on these clusters by applying the end coordinates in the x,y,z dimensions of the activated areas as corner points of the boxes.
Finally, due to a finer granularity of IMG clusters, analysis of context based on these clusters provides yet another tool for further refinement of annotation of proteins that cannot be distinguished through the COG- and Pfam-based gene context analysis.
The analysis of the current study is based on these clusters.> -wrap-foot> *p < .001.001
Based on these clusters proteins were phylogentically stratified and gene-set enrichment was performed for GO-terms using the R-package TopGO and InterPro domains using Fisher's exact test.
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Then, these typical daily scenarios are established by the multiple scenarios technique based on these clustered data.
One hundred and thirteen genes were identified as significantly up-regulated in patients with sporadic TAA (average FC>1.3 and FDR<4%) and hierarchical clustering based on these genes clustered the familial and sporadic TAA patients into distinct branches (Figure 5B) (Table S3).
Three regions were defined based on these three clusters.
Based on the assumption that selection affects several consecutive SNPs, criteria to build a cluster of SNPs were defined, and based on these criteria, 13 clusters were identified.
Based on these aligned-read clusters, the Chrysalis and Butterfly modules were consecutively executed to produce the final reconstructed transcripts.
A: Yes... Based on these responses, the clustering algorithm can define that the new concept "apple" belongs to the same cluster of concepts "cheese", "bread", "meat", etc.
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