Sentence examples for based on these annotations from inspiring English sources

The sequence of each annotated lncRNA was retrieved using Galaxy based on these annotations, and the lncRNA candidates with the identical sequence and genomic locus were regarded as the same transcript.

Because not every AMP structure had CATH or SCOP annotation, one could not determine all unique AMP structural folds simply based on these annotations.

Based on these annotations a set of modules are extracted from a set of distinct ontologies, and are made available for the user, for complementary annotation.

Based on these annotations, metabolic pathways were reconstructed.

Based on these annotations links to external databases enables the user to obtain further details.

Based on these annotations, several candidate genes were identified as duplicated in and among lineages.

Based on these annotation sources the teams used either the GlobalTest or the Fisher exact test to identify differentially expressed gene sets.

Based on these annotation analyses, we discovered that REGγ is linked to large numbers of cancer related genes, including Myc & RAN in oncogenic pathway, BUB3 in spindle check-point function, BTG2 in cell cycle transition, DDB1 in DNA damage repair, DAPK2 in programmed cell death, in addition to genes in the p53 pathway like PTEN.

Based on the annotations, these contigs represented a total of 11707 ferret genes.

We then constructed the protein-sequence-based pangenomes, based on these automatically generated annotations, and corrected them for the presence of possible HGT artifacts (as described for the pangenomes generated based on NCBI annotations, see supplementary figs. S1 and S2, Supplementary Material online, left columns).

Based on these two annotation databases, 3283 of 4294 genes and 2491 of 2903 proteins were associated with 614 GO terms.