Sentence examples for based on their copy from inspiring English sources
The phenotype of previously uncharacterized strains can be predicted based on their copy number at these loci.
When using CNVtools to test for association, individuals were clustered into two categories based on their copy numbers.
The prostate tumor data were derived from a previously published dataset [ 9] and the 102 cases were selected based on their copy number profiles.
All these methods described above, however, attempted to identify repeat elements based on their copy numbers in a genome, thus facilitating identification of general repeat elements.
Unsupervised hierarchical clustering stratified ovarian carcinomas (n=68), based on their copy number changes, into two main clusters (A and B).
As an additional test to validate the correlation between the classification and the outcome, we also profiled a group of outcome-annotated validation samples and assigned them to the existing clusters based on their copy number profiles.
Four classes of abnormal segments were considered based on their estimated copy number [ 16]: single copy deletion (copy number < 1.5), double copy deletion (copy number < 0.5), gain of copy number (copy number > 2.5), amplification (copy number > 3.5).
These values allowed us to rate the contig sequences based on their genomic copy numbers and proportion in the genome, respectively.
The percentage of genomic alterations in these genes was ranked based on their mRNA expression, copy number variations and mutations.
Mitochondrial DNA and nuclear ribosomal DNA are convenient targets, due to conserved primer binding sequences and ease of amplification based on their typically high copy number.
All of the genes, identified based on their association of copy number and gene expression in the microarray analysis, were also differentially expressed in cancerous gastric samples compared to nonmalignant tissues according to the qRT-PCR and TRAC analyses.
