Based on the assumption that undetected or lowly expressed transcripts are less likely to produce detectable proteins, the package allows users to filter out proteins with undetected or lowly expressed transcripts.
Zhang et al. [ 21] classified the miRNAs as highly, moderately or lowly conserved, based on the number of plants in which each family of miRNA is predicted, although the number of ESTs available for different plant species varies highly.
We next binned the transcripts into groups of highly, moderately and lowly expressed transcripts (based on the microarray data), with an approximately equal number of transcripts in each bin.
To achieve this, we adopted the approach of Turro et al. (2014) for combining lowly identifiable transcripts based on the posterior correlation of their expression level estimates, tailored for a diploid transcriptome case.
Our results are further sustained by the fact that highly expressed genes may be under greater selective constraints than lowly expressed genes, based on the negative correlation between d N, ω, expression level and expression breadth in both P. glauca and P. abies (supplementary tables S1 and S2, Supplementary Material online).
Based on the RPLM values, genes were classified as lowly-expressed (RPKM < 1), moderately-expressed (1 ⩽ RPKM ⩽ 20) or highly-expressed (RPKM > 20), respectively.
Mughal E Azam (K Asif, 1960) Loosely based on the life of Mughal emperor Akbar (whose wayward son falls for the lowly courtesan Anarkali against his wishes), Asif's historical melodrama set the template for modern Indian cinema.
When only lowly expressed genes were included the concordance based on the contingency table diagonal and correlation coefficient steeply decreased whereas the other measures were both hardly affected.
But they also promise revolutionary land reform based on the principle of land to the tiller, equal rights for women and lowly castes, and much else.
A History of Cao Dai In 1919, Ngo Van Chieu, a lowly Vietnamese civil servant working for the French colonial administration, received a vision of God and, following the heavenly message, began preaching a credo based on the unity of world religions.
