Sentence examples for based on the junction from inspiring English sources
Two unannotated transcripts, namely, NP_CUFF.172640.1 and NP_CUFF.136416.1, were found to contain an intron which showed their direction based on the junction sequence.
Figure 15 illustrates the comparison of the calculated flow distribution based on the junction loss coefficients from CFD simulations at low Reynolds numbers and the available correlations for turbulent flows from Idelchik[9] and Bassett et al.[10].[10]
A total of 530 AS events were identified in 443 cucumber genes based on the junction sites derived from EST-genome alignments (Additional file 1).
Methods: We describe a discriminative undirected graphical model to label gene-expression time-series image data, with an efficient training and decoding method based on the junction tree algorithm.
Regarding chromosome 6B, two ISBP markers, ISBP0092 and ISBP0465, were designed based on the junction sequences, including the gypsy-type retrotransposon (Additional file 6), and these mapped close to the positions of the rRNA genes on CTG151 and CTG142, respectively (Fig. 4).
Since the insertion sites of transposable elements are unique and often show high polymorphism even among wheat varieties, markers designed based on the repeat junction sites have also been termed "insertion site-based polymorphism (ISBP) markers.
The field effect transistors (FET) based on the planar junction turn out to be good bipolar transistors, the maximum current on/off ratio can reach up to 1 × 104, and the subthreshold swing is 243 mV/dec.
Since our transcriptomes are reconstructed from a non strand-specific RNA-seq dataset, we determined the direction of transcripts based on the splice junction sequences.
To detect Aichi virus, we conducted a nested PCR with primer sets based on the 3CD junction region, as described (12, 13 ).
In this study, we found that the duplicated block is specific for the K allele and it was used to develop a DNA test based on the breakpoint junction.
Based on the splicing junctions identified from our datasets using HMMSplicer [ 37], we found evidence for antisense spliced junctions in 123 of the 1247 genes with NATs (Additional file 11: Table S5).
