Sentence examples for based on the annotated from inspiring English sources

Primers were designed based on the annotated ND1 gene within the Sus scrofa mitochondrial genome sequence (GenBank Accession NC_000845).

Thus, we present two inter-annotator agreement scores: (i) sentence level: based on the sentences annotated by both annotators and (ii) fact level: based on the annotated facts that were extracted from these abstracts.

Given that RADPRE analysis was based on the annotated structures of genes, it has to rely on accurately annotated genomes.

Sometimes the next best match was a very good one which provided useful information based on the annotated gene product of that ortholog.

This peptide overlaps the region upstream to the currently annotated translation start site and the first three amino acids based on the annotated translation start site.

*Sequence comparision were based on the annotated protein ID in Addtional file 2; two filters were made for the selections: 1) every protein ID annotated to O. hannah species; 2) proteins of other snake species which are also reported in Vonk et al. [ 20 ], i.e., neurotoxin-like protein 1, belonged to [Causus rhombeatus] species but reported in BOh species.

The histidine leader-peptide gene hisL was predicted based on the annotated feature in RFAM; others were found by sequence gazing, guided by known operon leader peptides in E. coli K-12, as annotated in the Ecocyc database [ 41].

This is because the statistical test is based on the annotated DNA sequence, which is in format of a single strand (from 5′ to 3′) in GenBank, but its information of gene location and direction represents both DNA strands.

To generate the set, we parsed the annotation files for the human reference assembly GRCh38 for GeneID and protein accessions and applied selection criteria to pick one per gene based on the longest annotated CDS per GeneID.

First, we selected IORs with RNA-seq expression exceeding a minimal value of read counts based on the previously annotated sRNAs as well as annotated ORFs (protein coding mRNAs).

This paper attempts to address this problem by proposing an information search and retrieval framework based on the semantically annotated multi-facet product family ontology.