Sentence examples for based on the alignment between from inspiring English sources
Slopes are then further partitioned based on the alignment between slope angle and dip angle.
First, slopes are classified into three functional types based on the alignment between the dip azimuth and slope aspect.
It is based on the alignment between the sequences to be modeled with the sequence of known template structure.
The final step in modelling is coordinate generation based on the alignment between template protein structures and the target sequence.
The heatmaps are based on the alignment between TP miRNA-mRNA pairs using 'fasta' sequence alignment tool version 35 [ 74].
EST representation was determined based on the alignment between ESTs and the genomic or cDNA sequence of the corresponding gene and usually showed > 97% sequence similarity.
Based on the alignments between tRNAs and sequenced small RNAs, we identify a unique characteristic suggesting independent pathways of tRNA processing.
Discordances between BtOM1.0 and the UMD3.1 were called based on the alignments between the consensus maps that were trimmed and stripped off from the last (8th) cycle of iterative assembly (Fig. 1; Methods; [ 26]) and then manually curated.
To investigate the selection pressures imposed on the novel exons identified by comparative analysis of cross-species EST libraries, we calculated the evolutionary rates (dn, ds, and dn/ds) based on the alignments between the identified ASVs (including the novel exons and their flanking exons) in the target species and their corresponding EST sequences in the subject species (Methods).
Based on the alignments between the genomic DNA and the cDNA sequences in orthologs, twelve genes (70.59%) shared the same intron/exon structures in different genomes, and variations in length were mainly caused by insertion/deletion events within introns (Additional file 2: Supplemental Figure S1A).
A phylogenic analysis was conducted based on the alignment of the amino acid sequence located between reverse transcriptase domains I and VII deduced from the upstream nucleic sequence of the 21 elements.
