Sentence examples for based on templates from from inspiring English sources

Based on the above, we developed the following scheme to decode the interaction potential: Build homology submodels of mutant TF based on templates from known complex structures.

Agilent Sure Select Enrichment of exonic regions, SOLiD next generation sequencing and bioinformatic workflow are detailed in Additional file 1. Structural information on ErbB1/EGFR (PDB 1m14) was obtained from the Protein Data Bank (PDB) and the structure of RIPK2 is from the SWISS-MODEL Repository [ 17], based on template 2eva from PDB. Visualizations were done with PyMol.

✓ Ability to construct rules based on templates.

Methods based on template matching of features extracted from the query and speech repository [9 11, 15, 18 27].

In contrast, strictly based on template "Watson" versus "Crick" strand inherited from the parental cell, haploid fission yeast sister cells developmentally differ by inheriting sister chromatids that are differentiated by epigenetic means.

A software application has been developed for OPTIGOV based on a template from Microsoft Office products, to allow an easy interface with them.

This is in contrast to the homology model that, based on a template from a Bacillus species, placed the cysteine residue as impinging on the edge of the substrate binding site and partially occluding the opening.

Modeling these into the active site involved two steps: (1) creation of an N′-truncated, nonphosphorylated substrate based on a template from a solved structure of a similar peptide and (2) docking of this peptide into the binding site using FlexPepDock (39), including the addition of the N′ residues and the C′ phosphate ion.

Modeling of protein structures based on structure templates found from experimentally determined structures, called template-based modeling (TBM), is currently the most effective way to build a 3-D structure for a protein of unknown structure.

At the same time, the importance of GPCR modeling studies that are not based on structural templates comes from the fact that out of >1000 known GPCRs, only one such potential template exists (rhodopsin).

Cyclic voltammetry and electrochemical impedance data revealed the differences between the several TiO2/PEDOT PSS systems, with the best performance observed in systems based on TiO2 templates obtained from the TiCl4 sol gel route and containing residual mesoporous carbon.