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Instead, we manually docked both the donor substrate UDP-GalNAC and the acceptor substrate analog 1-L-Ins-1-P into the WbnH structure based on structural conservation.
RNAz calculates a "RNA class probability" or P-value based on structural conservation index and thermodynamic stability scores.
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Putative L. major and Trypanosoma brucei ARF/ARL family members have been classified based on structural considerations, amino acid sequence conservation combined with functional data on Kinetoplastid and human orthologues.
Taking the advantage of computational algorithms that have been developed based on structural characteristics of miRNA precursors and phylogenetic conservation for the prediction of miRNAs [5], [11], [37], [47], [48], [49], [50], [51] as well as the recently-sequenced domesticated silkworm (B.
However, RNA secondary structures were predicted from their sequences, according to the RNAZ software, which predicts RNA functional structure based on both, structural conservation and thermodynamic stability.
The SVM is based on structural risk minimization theory [46].
SVM algorithms are based on structural risk minimization.
While Incremental SVM is based on structural risk minimization.
(B ) Cross-linking strategy based on structural models.
Based on the structural conservation observed in the exocyst subunits, we hypothesized that the other subunits would have similar helical bundle structures [3].
In this limit, any model based on assuming structural conservation will break down.
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