For each gene symbol, we collected all occurrences in PDQ trial documents based on simple string matching.
In this paper we try to propose a strategy based on string or pattern matching to handle data streams.
Many scholars of innovation have implemented ad-hoc disambiguation methods based on string similarity thresholds and string comparison matching; such methods have been shown to be vulnerable to a number of problems that can adversely affect research results.
The proposed solution is based on string comparison operation.
Retrieval models based on simple string matching performed better than models based on semantic tags alone with respect to best mean recall and mean precision at high recall-levels.
This section presents two applications of CGR based on exact string matching that rely on LCE described above.
Such a similarity operator is based on approximate string matching methods, so non-literal data fields such as dates or numbers have to be converted before processing.
Most state-of-the-art algorithms of this type are based on classical string matching algorithms (Liefooghe et al., 2009; Pizzi et al., 2007, 2009; Salmela and Tarhio, 2007; Wu et al., 2000).
SeedMatch is our own algorithm based on exact string matching of the microRNA seed region with the mRNA sequence similar to TargetScanS [ 2] or PicTar [ 7] that additionally searches for a perfect 3' seed to better reflect the binding patterns introduced by Brennecke et al. [ 9].
