Sentence examples for based on shared sequence from inspiring English sources

Masked read sequences were pairwise compared and grouped into clusters, based on shared sequence similarity.

However, based on shared sequence identity, 83 of the 105 full-length Bgh effector candidates group into 17 clusters.

We identify 13 candidate genes that correspond to type 1 VGPC toxin genes based on shared sequence identity, conserved cysteine residues, and toxin gene network reconstruction (Table  2).

Structural analysis revealed substantial diversity in motif content within the NBS domain and grouping of specific motifs into sub-classes based on shared sequence origin.

Similarly, there are currently no known pir homologs in P. falciparum, although rif/stevor has been suggested as related gene family based on shared sequence motifs and secondary structural features [ 20].

In order to assess EST redundancy in the whole collection and provide a survey of the Olea europaea drupe transcriptome, masked EST sequences were pair-wise compared and grouped into clusters, based on shared sequence similarity.

See also [ 98] that explicitly proposes to model different evolutionary outcomes with different evolutionary patterns (one tree, one rNOL, disconnected genome networks based on shared sequences, etc).

Because dereplication was necessarily conducted at the library level to produce representative sequences for each sampling unit [library], similarity (based on shared best sequence match) among representative OTU0.97 from the five libraries is provided in Table 2. Accordingly, there were 24 unique OTU0.97 representing the 16S rRNA gene sequence diversity across all five libraries.

In the case of the NAC transcription factor, the functional attributes appeared to be quite different in rice and wheat (Distelfeld et al. 2012) and indicated extrapolating function based on shared DNA sequence structure may not always be possible.

As a result of the weighted scoring system, HMMs are less sensitive to changes in the non-conserved regions of a given protein family than more traditional methods based on shared primary sequence similarity alone, like e.g. the standard Blast algorithm.

Inspecting the alignment of the 193 TvBspA with TMD-CCT identified several related sequences (co-aligned) based on shared CT sequences.