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SNPs chosen for the array had the following characteristics, (i) putative minor allele frequency greater than 0.33 based on sequencing data, (ii) contig lengths greater than 200, (iii) only one SNP per contig, (iv) compatible for the Infinium II Assay (i.e. A/G, A/C, T/G or T/C), and (v) Assay Design Tool (ADT) scores greater than 0.85.
Based on sequencing data, all 19 colonies contained the correct (in frame) VHH fragments.
An additional 21 SNPs were known to be strongly linked to 135181 based on sequencing data.
Based on sequencing data from a limited number of accessions we were able to estimate the size of an SRR within 1 bp.
Among the 112 polymorphic in vitro SNPs of the genotyping assay, 101 were previously identified in alignments containing 10 sequences or more from the Aquitaine population and were used to assess the reliability of allele frequency estimates based on sequencing data.
The correlation of the allele size and number of repeats was determined based on sequencing data.
Similar(46)
Cluster pattern based on sequence data at any one gene locus.
The advances in sequencing techniques and the accumulation of many protein sequences without the purified protein challenge the development of computer algorithms to identify dominant T-cell epitopes based on sequence data alone.
A: Right now our diagnostics is largely based on sequence data from Sierra Leone.
Phylogenetic trees were calculated respectively based on sequences data of these two genes.
Based on sequence data, phylogeny analysis and actual restriction fragment length polymorphism (RFLP) analysis, the associated phytoplasma was classified as related to 16SrI-C subgroup.
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