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PICRUSt uses the OTU table of assigned taxa and their relative distribution to generate the relative abundance of functional categories based on sequenced genomes.
We believe our analyses provide overwhelming evidence in favor of a (USP15,(USP4,USP11)) branching pattern as opposed to the (USP11(USpattern5)) pathatn that would be inferred based on sequenced relatedness [ 19, 20].
To date, genome-wide analyses of 2R-MYB proteins have been conducted in numerous plant species based on sequenced genomes However, comprehensive analyses of MYB-related proteins in major land plants are still lacking.
Later work based on sequenced yeast chromosomes showed that some of them consist of alternating large domains of GC-rich and GC-poor DNA [ 12- 14], generally correlating with a variation in gene density.
Indeed, recent computer simulations based on sequenced genomes indicated that homologies of co-migrating AFLP fragments are greater between closely related taxa, and that fragment-size homoplasy is much lower in organisms with small (<400 Mbp) versus large (>2 Gbp) genomes (Althoff et al. 2007).
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And the momentum is pushing even more proactive solutions based on sequencing individual genomes.
Cluster pattern based on sequence data at any one gene locus.
The company offers tests for 23 different diseases, 15 of which are based on sequencing technology.
Based on sequence analyses, Korean TYLCV isolates were suggested to originate from two Japanese TYLCV isolates9.
We identified 54 438 protein-coding genes and functionally annotated 95.6% of them based on sequence homology.
nov. (Chlorophyta) based on sequence comparisons of the nuclear- and plastid encoded rRNA operons.
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