Representative sequences of the H5N1 viruses belonging to the Z genotype were selected from the GenBank based on sequence identity (100% identical sequences were excluded) and including wherever possible isolates whose whole genomes were available.
Based on sequence identity, one may have predicted that the jack pine and lodgepole pine proteins would similarly produce α-terpineol.
Based on sequence identity between paralogous copies, the nearly identical paralogs [ 31] were identified.
The sequencing data were analyzed using Basic Local Alignment Search Tool BLASTT 2.3.0) (https://blast.ncbi.nlm.nih.gov/Blast.cgi) and bacterial species were identified based on sequence identity from the database.
The template was the structure of δ-opioid receptor bound to naltrindole (PDB accession code: 4EJ4) which was selected based on sequence identity, similarity, and coverage as suggested by the server (no user intervention).
The data shown are obtained with distances based on sequence identity and pairwise deletion of gaps.
Further subdivision into 13 sub-families (LRRI-LRRXIII) is based on sequence identity and organization of the LRR domain.
Second, all the clean reads were grouped into clusters based on sequence identity and a minimum of 16nt overlap length.
Of those, 30 were assigned to specific species based on sequence identity to a well-annotated organism and 18 to a genus.
From the multiple sequence alignment (MSA) of the active sequences, we computed a matrix of pairwise distances, based on sequence identity.
In switchgrass two CAD genes (PviCAD1 and PviCAD2) have been identified and are implicated in lignification based on sequence identity, substrate specificity, and expression pattern [40].
