Cluster pattern based on sequence data at any one gene locus.
The advances in sequencing techniques and the accumulation of many protein sequences without the purified protein challenge the development of computer algorithms to identify dominant T-cell epitopes based on sequence data alone.
A: Right now our diagnostics is largely based on sequence data from Sierra Leone.
Based on sequence data, phylogeny analysis and actual restriction fragment length polymorphism (RFLP) analysis, the associated phytoplasma was classified as related to 16SrI-C subgroup.
Within the scope of ciliates, this finding provides direct evidence for the close evolutionary relationship between S. sulcatum and O. trifallax, and is much stronger than phylogenetic analyses based on sequence data for a single or a few genes.
A combination of subtype designations based on sequence data obtained from two or more gene loci.
Cyt b also gives better resolution when separating species based on sequence data.
Taxonomical assignments of uncultured microbes are routinely based on sequence data.
Phylogenetic hypotheses based on sequence data were generated using PAUP and MrBayes.
Multiple primer-pairs were designed based on sequence data for Seg-2, targeting each of the seven EHDV serotypes (Table 1 and Table S1 - supporting information).
In most of the sequenced strains, the three NE loci were fragmented into multiple contigs and it was therefore not possible to assess their uniformity based on sequence data alone.
