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The first deals with a dynamic monitoring of mutation and crossover rates whereas the second involves a selection step based on sample "distance".
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Differential expression between the populations was visualized using the NMDS tool, which produces a two-dimensional map based on sample dissimilarity calculated using Euclidean distance.
Heatmap plot and dendogram based on sample-to-sample Euclidean distances between RNA-Seq samples (dark for small distances).
(B) Heatmap plot and dendogram based on sample-to-sample Euclidean distances between miRNA-Seq samples (dark for small distances).
Pairwise distances between sites were calculated based on sampling geographic coordinates using distance_matrix_from_mapping.py script in Qiime (Caporaso et al. 2010b).
Primary among these are methods based on distance sampling and spatially explicit capture-recapture.
Animal movement is also one of the major issues associated with conventional animal surveys, especially when considering methods based on distance sampling.
Thompson et al. (2009) presented a methodology for density estimation suitable for vocal mammals in forested habitats, also based on distance sampling concepts.
Analysis methods based on distance sampling and spatially explicit mark-recapture methods are promising candidates for the analysis of acoustic data for density estimation; alternatively, the information to estimate the detection function may come from auxiliary information or analysis rather than measured distances to detected objects of interest.
In Equation 1, f(dist ij ) is a neighbor weighting function that assigns a weight to a sample s j based on its distance from the sample s i.
In order to perform fault detection, TEDA analyzes the density of each read data sample, which is calculated based on the distance between that sample and all the others read so far.
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