Sentence examples for based on sample alignments from inspiring English sources

Quality score recalibration based on sample alignments to a reference genome has been identified as one solution to this problem [ 43].

The fast rotational alignment is based on sampling of simultaneously over all rotations R. To do so, we apply a fast 3D volumetric rotational matching (Kovacs and Wriggers, 2002; Xu et al., 2012).

We then constructed multiple alignments of peptide sequences using ClustalW and constructed nucleotide alignments based on the peptide alignments.

We constructed a phylogenetic tree based on multiple alignments of genotyped SNPs, including two P. hanceana samples as outgroup.

N percentage is the occurrence of N (any nucleotide) in the sample Based on basic local alignment search tool (BLAST) searches in the non-redundant (NR) database at NCBI (download 14 April 2014), the majority of S. elaeagnifolium unigenes (39.8 %) shares similarity with grape sequences while less than 6%% of sequences shares similarity with other Solanaceae sequences (Fig.  1).

Highest order polynomial coefficients of singular vectors (eigenvectors) are utilized as square error to obtain a compact decomposition based on phase alignment of frequency samples.

The SILVA seed alignments are based on alignments published by the ARB project in 2004.

Two families were identified based on LTR alignments.

Based on these alignments PCR primers were designed.

Based on the alignments, a maximum likelihood tree was constructed.

All the above comparisons were based on Bowtie2 alignments.