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‡Primer location based on reference strain L2/434 16SrRNA sequence.
§Primer location based on reference strain L2/434 ompA sequence.
a - based on reference strain omp1 sequence b - E variant has 100% homology to Genbank sequence GU903922 (C. trachomatis strain 1969 from Australian MSM population) c - G variant has 100% homology to Genbank sequence FJ261928 (G/IU-FW0267 G/IU-FW0267erovar unable to be determined.
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The approach involves assessing the absence or presence of genes from strains based on reference genome(s) fixed to microarray, followed by robust statistical algorithms to infer the evolutionary relationships between test strains that is usually represented as a phylogenetic tree [ 14- 18].
Furthermore, SNPs were based on reference and clinical isolates of multiples of the same strains from 6 geographic regions, representing a broad diversity of this species.
Redrawn based on reference [67].
Abridge version based on Reference [8].
Based on reference [ 35].
The aim of the present study was to document in Thai children the safety and immunogenicity of an H5N1 influenza vaccine based on a reference strain derived by the UK National Institute for Biological Standards and Control (NIBSC) from the pathogenic influenza A Vietnam/1194/2004 strain.
In case of positive control, we based on the reference strain of Porphyromonas gingivalis W83 after lysis and neutralisation procedures or DNA isolated from it.
Binding site positions were identified based on a reference strain within each clade; this was straightforward due to relatively low variation within each clade.
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