Sentence examples for based on reference sequence from inspiring English sources

However, qRT-PCR widely used for miRNA quantification is mainly based on reference sequence [19].

cDNA numbering is based on reference sequence: GenBank NM_000038.

The data based on reference sequence similarity is taken from HomoloGene and cross-referenced.

Site numbers denote bp alignment positions of individual SNPs and starting positions of Indels based on reference sequence AY323283 of Genbank.

IGFBP7 primers (Additional file 1) were designed using Primer3 software [ 51] based on reference sequence (RefSeq) NM_001553 (IGFBP7), and on the genomic structure of the IGFBP7, as made available by the Human Genome Browser database [ 52].

SIFT is based on reference sequence alignments and produces scores which can be classified as intolerant (0.00 0.05), putatively intolerant (0.051 0.10), borderline (0.101 0.20), or tolerant (0.201 1.00), according to the classification proposed previously [ 25– 27].

Additionally, miRNAs detected by microarray are based on reference sequences, however, the reference sequences are often not the dominant ones for some miRNAs, which might be another reason causing that discrepancy.

Primers were designed based on reference sequences obtained from the Maize Assembled Genomic Island (MAGI) Database [45].

In some of the cases investigated here libraries based on reference sequences would outperform traditional tiling libraries.

Those targets in Figure 2b) that do not indicate any degree of saturation with regard to 〈R〉 or do indicate saturation but not at an acceptable level of

(Based on reference sequences AY323264 and AY279022, for CCoAOMT1 and CCoAOMT2, respectively).