Sentence examples for based on reading levels from inspiring English sources
Although Ms. Murphy's class is divided into three groups based on reading levels and other skills, it is nearly impossible to determine which of the 6-year-olds receive special education services.
When picking novels, 51percentt of elementary school teachers reported doing so based on students' reading levels regardless of grade, as did 40percentt of middle school teachers and 28percentt of high school teachers.
A total of 77 samples were initially processed, of which, only 70 passed quality control based on read mapping and base level quality scores.
With sufficient training data, one would be able to develop a lookup table or calibration curve to set τ based on read depth and MAF level of interest.
However, it may be possible to filter the genome-guided Trinity results based on read support or expression level to yield a more manageable P. falciparum transcriptome assembly [Table 1, Additional file 9].
To eliminate the influence of different gene lengths and sequence discrepancies on expression calculations, gene expression levels based on read counts obtained by RSEM (version v1.2.15) were normalized using FPKM (fragments per kilo bases per million fragments) transformation (Li and Dewey 2011).
Genes were categorized based on increasing expression levels (based on reads assigned per kilobase of target per million mapped reads (RPKM)) using the RNA-seq data (GSE23865, [ 18]).
First, Cufflinks fragments per-kilobase of exonic length per million base pairs mapped (FPKM) expression values were validated against SailFish, an alignment-free quantification method that uses K-mers and defines expression levels based on reads per-kilobase of exonic length per million base pairs mapped (RPKM) [ 39].
Last, regions are classified to allele-specific or non-specific methylated regions, based on read assignments and the predicted methylation levels from the previous step.
Gene expression levels were calculated based on read counts which also included unambiguous mapped reads according to negative binomial distribution.
