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The list-wise approach takes ranking lists of objects as instances in learning and learns the ranking model based on ranking lists.
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The matches are based on ranked lists submitted by hospitals and the 15,000 or so students, and both sides agree in advance to accept the match.
The objective of the proposed approach is to combine the unsupervised recommendations based on ranked lists with supervised recommendations based on user interactions obtained from relevance feedback sessions.
Open image in new window Fig. 2 An example of re-ranking: a Probe image 1 and its ranked list; b Probe image 2 and its ranked list; c Probe image 2 and its re-ranked list based on ranked list (a).
Since the method is based on ranking a list according to a phenotype, the ranked list can be derived from other measures besides gene expression fold changes from microarray chips or deep sequencing; such phenotype measures may include odd ratios of single nucleotide polymorphisms (SNPs), or a microRNA profile assay derived from microarray technologies or deep sequencing.
The difference in the cumulative number of observed matches with the ARED database based on ranking in our list and the expected number if we had randomly ordered our list was calculated.
CAT plots quantify the consensus of two lists, based on ranks.
Uncertainties accumulated scores based on rank and frequency, resulting in short lists of around 30 uncertainties per category, which were taken to final workshops.
Especially what deserves to be mentioned most is that there are also list decoding methods based on rank distance [8] and Hamming distance [34, 35].
For clusters with duplicates we identified the most likely ortholog in each case using a score system based on rank in the Blast E-value score list.
eFIP performance evaluation on document ranking as measured by nDCG (normalized discounted cumulative gain) based on the ranked lists of abstracts ranged between 93% and 100% (Table 4).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com