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The judgment rule based on proportion method is as follows.
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We refer to this as the sequence capture (SC) dataset.> -wrap-foot> a3 of each breed We identified common SNPs in the SC dataset based on a cutoff of minor allele frequency >0.1 and then inferred the frequency of each SNP in each pool in all samples based on proportion of reads matching each allele (see methods).
The Allred scoring method was used for expression scoring of ER and PR based on proportion and intensity.
RRM1 expression level was assessed based on proportion.
Two wells with drug free media were used as negative controls.> -wrap-foot> The red ones indicated critical concentrations Drug sensitivity test was done based on modified proportion method in 24-well DST plate [ 25].
The methods used to test for isoniazid resistance are now relatively standardized and based on the proportion method in which resistance is defined as growth on medium containing 0.2 μg/mL isoniazid that exceeds 1% of the growth on control medium (36 ).
Quantitative data was analyzed using MedCalc version 13.2 (MedCalc Software, Ostend, Belgium) and StatPlus version 5.8.2 (AnalystSoft Inc .. Statistical methods were primarily descriptive and based on proportions and percentages.
Standard methods for DST are based on either the proportion method and performed on solid media, or on critical concentration assays performed in liquid culture systems [ 5].
Cultures for M. tuberculosis were carried out using the classical Lowenstein-Jensen (LJ) solid medium and susceptibility to different antituberculosis drugs (rifampicin, isoniazid, ethambutol and streptomycin) was based on the standard proportion method.
Based on this method, a large proportion of mixed sites observed in F. pringlei indicated a high probability that F. pringlei was from hybrid of pure F. pringlei and F. angustifolia.
The standardized asymptotic 95%% CIs for the group difference in proportions were calculated based on the method 6 described by Newcombe [ 50].
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