Sentence examples for based on predicted protein from inspiring English sources
In combination with other 11 rational features based on predicted protein secondary structure sequences proposed by the previous researchers, a 36-dimensional representation feature vector is presented to predict protein secondary structural classes for low-similarity sequences.
Among the 111 features, 100 features based on pseudo-position specific scoring matrix (PsePSSM) are selected to reflect the evolutionary information and the sequence-order information, and the other 11 rational features based on predicted protein secondary structure sequences (PSSS) are designed in the previous works.
turkmenica (Htur_0954-0962) and based on predicted protein homology, it appeared that the two loci were evolutionarily very closely linked.
The phylogenetic tree based on predicted protein sequences of PBF sequences from different grasses agrees with their known phylogenetic relationships (fig. 2 A).
We first decided to check for nearest relatives/neighbors in databases using phylogenetic analyses of the genes for the putative chitinolytic enzymes (based on predicted protein sequences).
In addition, based on predicted protein structure and domains, there is an overall similarity between members within the Zip3 group members and Vilya.
Identified phosphoproteins mainly fell into three categories based on predicted function: proteins involved in cellular communication, transcriptional regulation and cellular structure.
As an example of intuitive relationships, one of the connected components consists entirely of associations between 11 cataract disorders, all of which are based on predicted interactions between crystallin proteins without experimental support in public databases.
STRING is a comprehensive tool integrating protein association information with the capability to transfer known interactions from model organisms to other species (e.g.: from mouse to human orthology genes/proteins) based on predicted orthology of the respective proteins.
A conceptually similar database, 'BackPhyre', has independently been generated, using Phyre (Kelley and Sternberg, 2009) rather than HHpred as a starting point to identify homologues of known proteins based on predicted structural similarities.
