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However, prediction based on place fields and directional phase fields outperforms both of these metrics.
As a separate analysis of encoding without using the Bayesian decoder, I applied a simple spatial reconstruction algorithm based on place fields during running to the replay events.
To corroborate the results from the Bayesian decoder, I furthermore applied a simple spatial reconstruction algorithm, based on place fields during running, to the path replays.
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DOI: http://dx.doi.org/10.7554/eLife.03542.011 For the independent coding model, we find that peer prediction provides a higher level of information about a neuron's firing than predictions based on place and nondirectional phase fields, despite the absence of intra-assembly coordination in our simulated data.
Analysis used Genomatix-MatInspector [ 41] based on PLACE [ 42].
We computed the proportion of spikes representing proximal locations and assessed whether the proportion differed significantly (using a binomial test) from what one would expect based on the place field distribution of the cued arm.
We also find that nondirectional phase fields, as assumed by (Harris et al., 2003), yield little improvement in predictability of a neuron's firing compared with predictions based on the place field alone, and for high phase locking are detrimental.
Both techniques are based on placing four abdominal trocars.
Templates were generated based on the location of the peak firing rate of each cell (if a cell had more than one place field, the field with the highest firing rate was used).
Remappings based on permutation of place field locations of synchronous cells, which are permissible in one dimensional environments, are no longer tenable in the two dimensional case due to constraints over each running direction.
molecular mechanics based on force fields.
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