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Graphical genotypes are based on physical distances according to IRGSP 1.0 of the rice genome sequence [ 52, 53 ].
The new extended gene definitions were compared with definitions based on physical distances to illustrate their advantages.
The markers used to access collinearity were based on physical distances, including those mapped on conflicting chromosomes.
Initially, new STRPs were selected and incorporated into our Screening Sets based on physical distances obtained from the December 2000 UC-Santa Cruz draft sequence assembly.
To accommodate our 5 K SNP capacity as well as provide genome-wide coverage, the chicken genome was divided into 1 cM blocks based on physical distances determined by the chicken genome assembly [ 15], then each bin was filled with a suitable ASE or and non-ASE SNPs.
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Two gene definitions were compared: one based on physical distance and the other based on genetic distance.
Abraham et al. found 68% concordance, with the cluster method based on physical distance on the genome as the single best method [43].
Markers that did not have an assigned position were extrapolated into the map based on physical distance to the flanking markers.
As the rate of decay of LD varies across the genome, a threshold based on physical distance might not be appropriate in regions where haplotype blocks are unusually long or unusually short in outbred populations.
The marker density varied across the FLW chromosomes based on physical distance in kilobase.
37 Markers that did not have an assigned position were extrapolated into the map based on physical distance to the flanking markers.
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based on physical characteristics
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based on physical considerations
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