Remarkably, F. solani strains from the lens case and lens solution in one instance were similar, based on phylogenetic analyses and molecular typing.
Based on phylogenetic analyses of newly isolated and EST-based sequences, we describe the duplication history of the AGL6 subfamily in angiosperms.
These genes were categorized into four subgroups based on phylogenetic analyses.
Based on phylogenetic analyses, the thermostable cellulases were derived from thermophilic Archaea and are distinct from known cellulases.
LBD16, LDB29, LBD17, and LBD18 genes are the closest homologs of the ARL1/CRL1 gene in rice based on phylogenetic analyses of the LOB family.
Based on phylogenetic analyses, we propose that the ancestral tetrapod and teleost Ugt1 clusters contained multiple Ugt1 paralogs.
This gene was more closely related to carboxypeptidase A than B based on phylogenetic analyses (Figures 4A and B).
Shigella spp. are widely recognized as E. coli based on phylogenetic analyses [53] and genome comparisons [54], though the original phenotypically derived taxonomy persists.
Further classification of the Ciona sequences into orthologous sets of different classes, families, subfamilies and types were carried out based on phylogenetic analyses (Table 1, Table S1).
Based on phylogenetic analyses and amino acid substitutions of analyzed sequences, we classified these seasonal influenza A/H1N1 isolates into four distinct HA clades: 1, 2A, 2B and 2C, which were designated by a previous study [29].
Each year, WHO recommends the most suitable composition of influenza vaccine strains for the Northern and Southern Hemispheres, based on phylogenetic analyses of HA and antigenic characteristics of circulating viruses.
