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Based on phenotype data, 70 and 36 F2 plants were selected from IR64 × NH219 and the reciprocal cross respectively by including the extreme phenotype plants for each of the 8 traits.
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Based on phenotypic data from three different phenotyping platforms, including field trials, our study showed that the Cbf gene family plays an important role in FT of rye.
Similarly, we found no evidence that phenotype data were missing based on phenotype.
If the secondary phenotypes add value to the predictions, then a performance increase should be visible from the Area Under Curve (AUC) of the two ROC curves (one for the predictions based on primary phenotype data, and one for the predictions based on primary and secondary phenotype data).
This project provided us the unique opportunity to holistically maximize actionable variants to return to 450 of 894 participants through the EHR based on both phenotype data derived from the EHR and sequence data.
The 8 accessions used in the analysis were selected as the most diverse materials (based on pedigree, phenotype data and some initial marker analysis) from a pool of breeding lines and germplasm collection available to us.
The only study directly comparable to ours, in the sense of estimating a large number of cell cycle parameters based on mutant phenotype data, is a paper by Panning et al. [ 34] on global parameter estimation for the Chen-2004 model [ 16] with a data set consisting of phenotypic characterizations of 115 budding yeast strains.
38 Where there are sufficient data we will stratify our analysis by the degree of G6PD deficiency, using standard classifications based on phenotypes.
The maps are meant to document and monitor different species based on phenotypes (physical appearance).
This population was also used for QTL analysis based on the phenotyping data generated at ICRISAT, Patancheru (India).
Furthermore, even though the annotations have been validated using the predicted secondary phenotype annotations in PhenoDigm's disease prediction algorithm, the disease gene candidate predictions based on the secondary phenotype data are not yet available.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com