Sentence examples for based on pairwise linkage from inspiring English sources

Based on pairwise linkage disequilibrium, haplotype block structures, and structure of genes, we identified the 14 most informative single nucleotide polymorphisms in the region (Table 2).

Using tagSNP methods based on pairwise linkage disequilibrium (r ≥ 0.80) (28), we determined that 4 tagSNPs are needed to capture common variants (minor allele frequencies greater than 5%) for Utah residents of northern and western European ancestry, Japanese from Tokyo, and Han Chinese from Beijing and 5 tagSNPs for the Yoruba population from Ibadan.

SNPs with minor allele frequency (MAF) of at least 1% among control sample were used to select tagSNPs based on pairwise r2 linkage disequilibrium (LD) map [38] using Tagger in Haploview version 4.0 (http://www.broad.mit.edu/mpg/haploview) [39], at a relatively stringent r2 threshold of 0.8.

Here, we use a weighted combination of complete-linkage and average-linkage clustering based on pairwise similarity values R p, q) for pairs of cluster (C p, C q ).

Clustering all our P450s genes was also performed based on pairwise sequence percentage identity using the complete linkage algorithm [ 12].

These clusters were then used as input to an average linkage clustering using MOTHUR [39] based on pairwise alignments using ESPRIT [40].

We build a hierarchical tree using complete linkage (furthest neighbor) agglomerative clustering, based on pairwise identity distance (100%% − identity %).

SNP lists from the HapMap project (http://hapmap.ncbi.nlm.nih.gov/) were imported into Tagger (in Haploview) [ 17], and haplotype tagging SNPs (tagSNPs) were selected based on patterns of linkage disequilibrium (LD) with boundaries suggested by Gabriel et al. [ 18]. tagSNPs were selected based on pairwise tagging with a minimum r of 0.90.

Individuals change attitude solely based on pairwise interactions between them.

Similar to AHP, PROMETHEE is based on pairwise comparisons.

This method calculates the scores for each alternative based on pairwise comparisons.