Sentence examples for based on overall nucleotide from inspiring English sources
Overall, the results obtained using the cuPSSM for full fragments were comparable to the SVM results based on overall nucleotide composition when ignoring the position information.
Based on overall nucleotide divergence rates between Wilson and SP1, Wilson and SP3, and SP1 and SP3 (Table 3), SP1 and SP3 were the most similar clones.
To determine whether the composition of SSRs deviated from expectation based on overall nucleotide, dinucleotide and trinucleotide frequencies of the genomes (determined using FREQSQ [ 79]), we used a Chi-square test.
We generated TUD based on Zero-Order Markov algorithms, which determine how patterns of tetranucleotide usage in each genome deviate from those expected based on overall nucleotide content, representing the genomic signature [ 19, 25].
We hypothesize that MRI could represent a novel class of genomic signals, based on overall composition and clustering of nucleotides rather than particular sequence motifs.
For example, there is a higher percentage of G nucleotides than expected based on overall mitochondrial base composition.
Traditionally, paleobotanists have classified such fossils based on overall similarity.
This quantity is calculated based on the overall nucleotide composition of the sequence by summing the probabilities of obtaining each of the three stop codons.
When predicted ratios of dinucleotide repeats were calculated based on the overall nucleotide composition, all genomes showed a significantly biased ratio (Chi-square test, p < 0.001).
