Based on our sequencing data analyses of Ghd7, the Ghd7-1 allele is common in indica rice varieties.
The CDS of OsGLRs were mostly obtained from a public database (http://rice.plantbiology.msu.edu/), some sequences were modified based on our sequencing data.
Based on our sequence analysis and known sex-related proteins, several genes putatively involved in sex differentiation, including Dmrt3, FOXL2, VASA, and FEM1, and other potentially significant candidate genes in C. rogercresseyi, were identified for the first time.
We developed a whole-genome DNA microarray based on our sequence data of the Hbt. salinarum strain R1 genome.
Based on our sequence variability results, especially with regard to RNA modifications, the accuracy of the sequence-based method is expected to be superior to that of the hybridization-based method.
Based on our sequence information, we designed primer sets spanning approximately 800 bp coding region for every PTP encoding gene that we identified in the zebrafish genome, as well as a nested primer set with a T7 primer in the reverse oligo, facilitating sequencing and probe generation (Table S1).
Based on our sequence analysis, some moeZ sequences have been misidentified.
AtPPC3 is induced in roots after nitrate treatment based on our sequencing data (Additional file 8).
Based on our sequence data and via fluorescence-activated cell-sorting analysis, we determined the ploidy of S. carlsbergensis.
Based on our sequence analysis of 158 chromosomes, we have constructed a map of LD across the region.
