The trees (npl) are the fusion of three phylogenetic trees built based on Neighbour joining [ 47], maximum Parsimony and maximum Likelihood [ 48].
MEGA7 software was used to calculate nucleotide diversity and to construct a phylogenetic trees based on Neighbour-joining method incorporated with Kimura 2 parameter (K2P) model (Kumar et al. 2016).
Also, in order to obtain a suitable fusion of information, a method for detection and reduction of saturated pixels, which is based on neighbour pixels information, has been proposed.
For example, if k has been selected as a neighbour of u 9 times and 8 of these times the list of top 10 recommendations included recommendations based on neighbour k, according Eq. 4, the trustworthiness attributed by u to k is 0.89, i.e. (frac{8}{9}).
A phylogenetic tree was built with MEGA 4 [ 85] based on neighbour-joining algorithm and nucleotide distance.
A phylogeny, based on neighbour joining of the amino acid sequence area from C1 to C8+1, is given in Fig. 3.
Phylogenetic trees based on Neighbour-Joining (NJ) were generated for the smaller SMR protein sequence data set (n = 338) using the program PROTDIST [Jones-Thornton-Taylor setting and NEIGHBOR (NJ setting)]; these programs are part of the program package PHYLIP (Version 3.63, [ 70, 71]).
Another well-known model is the Hegselmann and Krause (HK) compromise model [96], where agents form their actual opinion by taking an average opinion based on their neighbours' ones.
The rebroadcast list at each node is pruned based on its neighbours that were covered by previous transmissions.
For the models based on multiple neighbours, separate models were created where the predictions were combined using exponential, geometric, arithmetic, or inverse distance weighting (for more details, see Nigsch et al. [33]).
