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Protein GO enrichment based on molecular functions.
To another extreme, the KEGG database has annotated T2D pathways based on molecular functions.
Genes, which mapped to the ingenuity pathway database, were categorized based on molecular functions, gene ontology and biological processes.
For example 3.1 could compute cell properties based on molecular functions, 3.2 tissue properties based on cell properties, 3.3 organ properties and so on, as needed.
The values generated for the different GO-categories were used to generate the classification based on molecular functions, biological processes and cellular components.
BGSSJ is an XML-based Java application that organizes lists of genes or proteins according to Gene Ontology database for biological interpretation [ 64], and organizes information based on molecular functions, biological processes, and cellular components for a number of different organisms.
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Moreover, we had computed the relationship between different HIV viruses on the basis of 'Biological Process' and 'Cellular Component', and obtained very similar tree structures to the one based on 'Molecular Function' (Additional 2).
The predicted target genes were assigned to functional groups based on molecular function, biological processes and specific pathways.
Differentially expressed genes were classified according to the Gene Ontology functional category based on molecular function using DAVID (The Database for Annotation, Visualization and Integrated Discovery) [ 59].
b Classification of the acetylated proteins based on molecular function.
An additional set of 12,853 edges were added to the network based on molecular function Gene Ontology (GO) based mapping of the targets.
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based on molecular targets
based on objective functions
based on molecular considerations
based on special functions
based on auditory functions
based on linear functions
based on analytical functions
based on molecular mechanics
based on experimental functions
based on molecular patterns
based on multivariable functions
based on approximate functions
based on molecular techniques
based on harmonic functions
based on metric functions
based on scalarizing functions
based on molecular data
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