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There was also strong genetic differentiation across habitats based on microsatellites under the AMOVA framework.
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ITS sequences and a population-based screen based on microsatellites were highly concordant.
Genetic diversity based on microsatellites was high (Table 1, for population based estimates see Table S2).
In contrast to mtDNA, there is no previous study of minke whales worldwide based on microsatellites.
Genome-wide LD based on microsatellites was low.
Probability of assignment values conducted in STRUCTURE based on microsatellites.
The results from separate analyses based on microsatellites and AFLPs were combined.
Estimates based on microsatellites are given below diagonal and mtDNA variation above diagonal.
We defined 3 MUs based on microsatellites: Qinling, Minshan-Qionglai, and Daxiangling-Xiaoxiangling-Liangshan.
These four maps were mainly based on microsatellites, Restriction Fragment Length Polymorphisms (RFLPs) and protein polymorphisms.
F ST values between sites based on microsatellites ranged from 0.06 to 0. (Supplementary Material).
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